Use of shotgun metagenomic NGS combined with a previously-developed bioinformatics pipeline vs. traditional cultural/screening diagnostics to evaluate ecology of AMR and diagnose Salmonella in cattle feces before and after ceftiofur metaphylaxis

Lead PIs

Belk KE, Morley PSBeefUSAlogo

Co-PIs

Woerner DR, Yang H, Yang X, Noyes NR, Geornaras I

Funding Agency

National Cattlemen’s Beef Association (NCBA)

Funding Period

2015 – 2016

Lab Personnel

Keith Belk
Paul Morley
Dale Woerner
Hua Yang
Xiang (Crystal) Yang
Noelle Noyes